miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|91747180|gb|EB383835.1|EB383835 GAGCGGCCGCCCTTTTTTTTTTTTTTTTTTTGCTTGTGTCACCTGCTCTTTATTGGCTGCCATGGGTGACCGGAGTCCCC
AGCAGTGGCACTACGTAGAGGGAGGGTGGAGGAAGAGCGGGAAGGGAAGGGAAGGGAAGGAAGACGAGCCCCACGCCTGT
TCTGGGGTCCCCCCGGCCCAGGCACCGGAGGGCCTCGGTGGGGGCAGCGGGCTCAGGACGAGGGCGCCGAGCTGGGCTTC
TCCTCCCGGGACACGGGGATGGCTCGCTCGCTGTGGCCAGCGTCCAGGCCGGACTGCACCTTGGGGCCGGAGAAGGTGAG
CATGCCGTCCGCGGAGAGCGAGCAGGACAGCGCCGACTGGTCCACGTTGGAAGGCAGGCGGTAGCGCCGGTGGAACTCGC
GGGAAATGTAGCCGTGGTCATCCTGTCTCTCGTTGTGTTTGCCGTGGATCTCCACGAAGTCCTCCTGCACCTTCACGGTG
AGGTCCTCGGGCGAGAAGTGCTTCACGTCCAGGAAGATGACGAACTTGTCCCGGTCGGACCGCACCTCAGAGATGCCGGA
GTCCAGCACGGTGCGGAAGAGGGACTGGCGGTAGTAGGGGCTGATGGTGGACGACAGGAAGGGCAGCAGGTCATACTCGA
AGAGGCCCTCACCGAAGAACTGGTCGAACAGCCGGCTGGGGTAGAAGGGCCCCAGGGTGCGCTTGAAC




Most similar to sp|P02493|CRYAA_RABIT

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P02493|CRYAA_RABIT Alpha-crystallin A chain OS=Oryctolagus
           cuniculus GN=CRYAA PE=1 SV=3
          Length = 173

 Score =  311 bits (796), Expect = 4e-84
 Identities = 152/152 (100%), Positives = 152/152 (100%)
 Frame = -2

Query: 707 FKRTLGPFYPSRLFDQFFGEGLFEYDLLPFLSSTISPYYRQSLFRTVLDSGISEVRSDRD 528
           FKRTLGPFYPSRLFDQFFGEGLFEYDLLPFLSSTISPYYRQSLFRTVLDSGISEVRSDRD
Sbjct: 10  FKRTLGPFYPSRLFDQFFGEGLFEYDLLPFLSSTISPYYRQSLFRTVLDSGISEVRSDRD 69

Query: 527 KFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSAL 348
           KFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSAL
Sbjct: 70  KFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSAL 129

Query: 347 SCSLSADGMLTFSGPKVQSGLDAGHSERAIPV 252
           SCSLSADGMLTFSGPKVQSGLDAGHSERAIPV
Sbjct: 130 SCSLSADGMLTFSGPKVQSGLDAGHSERAIPV 161